Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm13035-201ENSMUST00000117496 342 ntBASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm8100-201ENSMUST00000182906 988 ntBASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm43138-201ENSMUST00000199123 708 ntBASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm7848-201ENSMUST00000210739 718 ntBASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm11509-201ENSMUST00000117358 325 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm11663-201ENSMUST00000117888 290 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm11941-201ENSMUST00000119904 610 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm8566-201ENSMUST00000120174 465 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm9797-202ENSMUST00000218003 294 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm10288-201ENSMUST00000084614 537 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdha3Q91Y16 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Gm14058-201ENSMUST00000116082 735 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Gm11960-201ENSMUST00000122068 925 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Mir5120-201ENSMUST00000175020 78 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms