Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm2260-201ENSMUST00000184965 657 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm43966-201ENSMUST00000203301 612 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm6867-201ENSMUST00000219165 425 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb1Q91Y08 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm11439-201ENSMUST00000118598 409 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm12266-201ENSMUST00000120311 962 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm17040-202ENSMUST00000170597 889 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Mir3547-201ENSMUST00000175461 88 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm10288-201ENSMUST00000084614 537 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm21811-201ENSMUST00000096485 930 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pcdhb1Q91Y08 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms