Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm7113-201ENSMUST00000120477 958 ntBASIC12.2□□□□□ -0.46
Usp3Q91W36 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.2□□□□□ -0.46
Usp3Q91W36 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm8582-201ENSMUST00000164061 789 ntBASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm20426-201ENSMUST00000173657 440 ntBASIC12.2□□□□□ -0.46
Usp3Q91W36 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm19353-201ENSMUST00000184561 445 ntBASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm37246-201ENSMUST00000192665 835 ntBASIC12.2□□□□□ -0.46
Usp3Q91W36 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm13809-201ENSMUST00000117921 597 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm11331-201ENSMUST00000119764 288 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm14739-201ENSMUST00000120424 802 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm27427-201ENSMUST00000185134 193 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm29036-201ENSMUST00000189967 877 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm6905-201ENSMUST00000205729 511 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm1821-202ENSMUST00000227415 750 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.19□□□□□ -0.46
Usp3Q91W36 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Usp3Q91W36 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp3Q91W36 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms