Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.05□□□□□ -0.48
Trim60Q8VI40 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.05□□□□□ -0.48
Trim60Q8VI40 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm26047-201ENSMUST00000157308 113 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm2991-201ENSMUST00000173338 480 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm8885-201ENSMUST00000189382 598 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm6621-201ENSMUST00000193251 772 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm26047-202ENSMUST00000198840 115 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm6450-201ENSMUST00000200896 574 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm44651-201ENSMUST00000207343 372 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim60Q8VI40 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.04□□□□□ -0.48
Trim60Q8VI40 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm11500-201ENSMUST00000118237 601 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm28937-201ENSMUST00000185413 695 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm29400-201ENSMUST00000187208 695 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm28662-201ENSMUST00000188446 695 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm28251-201ENSMUST00000188835 695 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm37318-201ENSMUST00000194325 695 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm38017-201ENSMUST00000194768 695 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms