Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm12490-201ENSMUST00000120255 560 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.48□□□□□ -0.89
Nup35Q8R4R6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup35Q8R4R6 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms