Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim29Q8R2Q0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim29Q8R2Q0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim29Q8R2Q0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Gm23596-201ENSMUST00000104304 132 ntBASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Gm18827-201ENSMUST00000188341 790 ntBASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Gm38314-201ENSMUST00000195709 625 ntBASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim29Q8R2Q0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Gm12857-201ENSMUST00000117678 592 ntBASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Gm11663-201ENSMUST00000117888 290 ntBASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Gm14017-201ENSMUST00000121934 386 ntBASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Gm4310-201ENSMUST00000177847 889 ntBASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Gm3332-201ENSMUST00000189337 928 ntBASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim29Q8R2Q0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm16570-201ENSMUST00000161951 436 ntBASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm43002-201ENSMUST00000200310 155 ntBASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 200.3 ms