Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Gm14999-201ENSMUST00000121039 624 ntBASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Gm9192-201ENSMUST00000183221 985 ntBASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Gm9794-201ENSMUST00000202370 423 ntBASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Gm4984-201ENSMUST00000115987 360 ntBASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Gm13570-201ENSMUST00000140763 309 ntBASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Gm29705-201ENSMUST00000212598 474 ntBASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Ebf4Q8K4J2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
Ebf4Q8K4J2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.58□□□□□ -0.71
Ebf4Q8K4J2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Gm5419-201ENSMUST00000119301 527 ntBASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Gm12490-201ENSMUST00000120255 560 ntBASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.58□□□□□ -0.72
Ebf4Q8K4J2 Gm23984-201ENSMUST00000157139 203 ntBASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms