Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm4310-201ENSMUST00000177847 889 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm29615-201ENSMUST00000185371 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm28224-201ENSMUST00000186078 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm29001-201ENSMUST00000186177 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm28292-201ENSMUST00000186593 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm28101-201ENSMUST00000187608 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm29076-201ENSMUST00000187689 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm28302-201ENSMUST00000187931 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm28646-201ENSMUST00000188220 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm28205-201ENSMUST00000189177 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm29032-201ENSMUST00000189797 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm28695-201ENSMUST00000190300 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm37448-201ENSMUST00000192795 697 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm44967-201ENSMUST00000207047 631 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cchcr1Q8K2I2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cchcr1Q8K2I2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cchcr1Q8K2I2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cchcr1Q8K2I2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cchcr1Q8K2I2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cchcr1Q8K2I2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cchcr1Q8K2I2 Gm22323-201ENSMUST00000103832 109 ntBASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm27320-201ENSMUST00000184892 109 ntBASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm9797-202ENSMUST00000218003 294 ntBASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cchcr1Q8K2I2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cchcr1Q8K2I2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cchcr1Q8K2I2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cchcr1Q8K2I2 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.76□□□□□ -0.21
Cchcr1Q8K2I2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cchcr1Q8K2I2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cchcr1Q8K2I2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cchcr1Q8K2I2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cchcr1Q8K2I2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms