Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm14058-201ENSMUST00000116082 735 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm649-201ENSMUST00000117284 1054 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm13035-201ENSMUST00000117496 342 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm11450-201ENSMUST00000121144 333 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Mir8093-201ENSMUST00000185043 137 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm45113-201ENSMUST00000207518 165 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.54□□□□□ -0.24
Rtn1Q8K0T0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm11783-201ENSMUST00000119549 885 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm13461-201ENSMUST00000120980 662 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm23085-201ENSMUST00000157849 293 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm5733-201ENSMUST00000190232 939 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm44387-201ENSMUST00000196298 145 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm6867-201ENSMUST00000219165 425 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 AC140209.1-201ENSMUST00000227875 284 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rtn1Q8K0T0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rtn1Q8K0T0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rtn1Q8K0T0 Gm12467-201ENSMUST00000117625 745 ntBASIC13.52□□□□□ -0.25
Rtn1Q8K0T0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rtn1Q8K0T0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rtn1Q8K0T0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.52□□□□□ -0.25
Rtn1Q8K0T0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rtn1Q8K0T0 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.52□□□□□ -0.25
Rtn1Q8K0T0 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms