Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm23200-201ENSMUST00000104379 132 ntBASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm14724-201ENSMUST00000118400 537 ntBASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm12196-201ENSMUST00000120954 262 ntBASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 H2-Q3-201ENSMUST00000172583 608 ntBASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm13812-201ENSMUST00000118061 1347 ntBASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm13810-201ENSMUST00000118584 1347 ntBASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rfwd3Q8CIK8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gm12217-201ENSMUST00000118858 696 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gm25881-201ENSMUST00000157783 103 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Mir3102-201ENSMUST00000175555 104 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gm18827-201ENSMUST00000188341 790 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Gm37466-201ENSMUST00000195692 652 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.99□□□□□ -0.65
Rfwd3Q8CIK8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms