Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm11793-201ENSMUST00000120433 981 ntBASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Gm43966-201ENSMUST00000203301 612 ntBASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28aQ8CEI3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm5187-201ENSMUST00000117317 991 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm15004-201ENSMUST00000119192 630 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm11660-201ENSMUST00000120955 412 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm11424-201ENSMUST00000121929 829 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm2553-201ENSMUST00000215986 605 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm19309-201ENSMUST00000218295 205 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms