Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Rgr-203ENSMUST00000225070 4704 ntBASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm27514-201ENSMUST00000183692 110 ntBASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm37008-201ENSMUST00000195712 319 ntBASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lysmd4Q8CC84 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm11989-201ENSMUST00000117240 672 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm11531-201ENSMUST00000117614 555 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm11362-201ENSMUST00000118838 850 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm15004-201ENSMUST00000119192 630 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm43118-201ENSMUST00000199149 775 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm4607-201ENSMUST00000206649 577 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lysmd4Q8CC84 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 280 ms