Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Gm14942-201ENSMUST00000119642 336 ntBASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Mir1943-201ENSMUST00000158276 73 ntBASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm14395-201ENSMUST00000120494 563 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm5523-201ENSMUST00000180415 997 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm10731-201ENSMUST00000181171 448 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm37299-201ENSMUST00000193951 826 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm9132-201ENSMUST00000210182 832 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm45770-201ENSMUST00000212105 616 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm6722-201ENSMUST00000221586 390 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Alx1Q8C8B0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.55□□□□□ -0.24
Alx1Q8C8B0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gm16071-201ENSMUST00000119589 793 ntBASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gm22902-201ENSMUST00000158488 302 ntBASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gm17826-201ENSMUST00000189720 798 ntBASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gm45856-201ENSMUST00000212752 416 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms