Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm13461-201ENSMUST00000120980 662 ntBASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm26047-201ENSMUST00000157308 113 ntBASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm23085-201ENSMUST00000157849 293 ntBASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm20495-201ENSMUST00000173902 235 ntBASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm28450-201ENSMUST00000187349 638 ntBASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm26047-202ENSMUST00000198840 115 ntBASIC12.84□□□□□ -0.35
Trim9Q8C7M3 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim9Q8C7M3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.83□□□□□ -0.35
Trim9Q8C7M3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gm13263-201ENSMUST00000121271 838 ntBASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gm3329-201ENSMUST00000159873 556 ntBASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.83□□□□□ -0.36
Trim9Q8C7M3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trim9Q8C7M3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.82□□□□□ -0.36
Trim9Q8C7M3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm13035-201ENSMUST00000117496 342 ntBASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm12997-201ENSMUST00000120207 640 ntBASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms