Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm24809-201ENSMUST00000175318 271 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm21778-201ENSMUST00000178779 471 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm30946-201ENSMUST00000198288 724 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm43671-201ENSMUST00000200422 433 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm23675-201ENSMUST00000157311 125 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm9192-201ENSMUST00000183221 985 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm28833-201ENSMUST00000189671 559 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm26670-202ENSMUST00000226862 340 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col6a6Q8C6K9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col6a6Q8C6K9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col6a6Q8C6K9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col6a6Q8C6K9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col6a6Q8C6K9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Gm13351-201ENSMUST00000118087 414 ntBASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Col6a6Q8C6K9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Gm15610-201ENSMUST00000120584 195 ntBASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Gm9089-201ENSMUST00000122027 526 ntBASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Gm8197-202ENSMUST00000193422 934 ntBASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.51□□□□□ -0.73
Col6a6Q8C6K9 Gm17825-201ENSMUST00000206836 794 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms