Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm25063-201ENSMUST00000104666 94 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm12036-201ENSMUST00000120008 530 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm15744-201ENSMUST00000161734 213 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm7741-201ENSMUST00000181445 989 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm9136-201ENSMUST00000193368 454 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm37826-201ENSMUST00000195329 322 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm44158-201ENSMUST00000203881 505 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm45120-201ENSMUST00000208880 408 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm5451-201ENSMUST00000080545 579 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm23680-201ENSMUST00000083162 164 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Gm25880-201ENSMUST00000104331 132 ntBASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Gm11244-201ENSMUST00000121243 237 ntBASIC12.36□□□□□ -0.43
Rd3Q8BRE0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Gm6114-201ENSMUST00000182472 968 ntBASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Gm29410-201ENSMUST00000188383 694 ntBASIC12.36□□□□□ -0.43
Rd3Q8BRE0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Rd3Q8BRE0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3Q8BRE0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms