Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm26461-201ENSMUST00000175064 290 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm27552-201ENSMUST00000183351 62 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm27844-201ENSMUST00000183613 62 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm27627-201ENSMUST00000183644 150 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 AY036118-201ENSMUST00000200021 923 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gm43962-201ENSMUST00000203898 190 ntBASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4Q8BQZ5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gm23949-201ENSMUST00000104027 127 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gm4909-201ENSMUST00000118749 794 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms