Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm22495-201ENSMUST00000104492 126 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm7765-201ENSMUST00000182585 974 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm42908-201ENSMUST00000197508 870 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm8111-201ENSMUST00000117659 987 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm7741-201ENSMUST00000181445 989 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm3945-201ENSMUST00000196637 683 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm44323-201ENSMUST00000198689 129 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm44540-201ENSMUST00000205640 354 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm9701-201ENSMUST00000077976 427 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm15329-201ENSMUST00000121408 155 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm18014-201ENSMUST00000183369 817 ntBASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smg1Q8BKX6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gm5808-201ENSMUST00000178090 357 ntBASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gm29548-201ENSMUST00000187012 694 ntBASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gm28105-201ENSMUST00000187788 694 ntBASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gm42660-201ENSMUST00000197733 947 ntBASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Gm12072-201ENSMUST00000118293 715 ntBASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smg1Q8BKX6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms