Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gm3329-201ENSMUST00000159873 556 ntBASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gm18367-201ENSMUST00000176139 600 ntBASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gm8420-201ENSMUST00000097103 598 ntBASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4dQ8BGV9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Gm15432-201ENSMUST00000121106 195 ntBASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Gm10051-201ENSMUST00000145209 414 ntBASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Gm2517-201ENSMUST00000215651 348 ntBASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4dQ8BGV9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms