Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 CT009754.4-201ENSMUST00000221430 565 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gm14585-201ENSMUST00000120713 634 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gm43186-201ENSMUST00000198130 824 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh19Q80TF3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm14460-201ENSMUST00000121511 639 ntBASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm6485-201ENSMUST00000160676 439 ntBASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm4654-201ENSMUST00000183305 982 ntBASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms