Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm22144-201ENSMUST00000157402 102 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm18204-201ENSMUST00000209835 793 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm19009-201ENSMUST00000223072 823 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Gm26448-201ENSMUST00000082446 203 ntBASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.34□□□□□ -0.43
Prpf38bQ80SY5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Prpf38bQ80SY5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Prpf38bQ80SY5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Prpf38bQ80SY5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm6630-201ENSMUST00000119199 454 ntBASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm13022-201ENSMUST00000121181 285 ntBASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm37299-201ENSMUST00000193951 826 ntBASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.33□□□□□ -0.44
Prpf38bQ80SY5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms