Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rad54bQ6PFE3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm13392-201ENSMUST00000117708 150 ntBASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm4157-201ENSMUST00000211647 679 ntBASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm7940-201ENSMUST00000218195 769 ntBASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rad54bQ6PFE3 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rad54bQ6PFE3 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Rad54bQ6PFE3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rad54bQ6PFE3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rad54bQ6PFE3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rad54bQ6PFE3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms