Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.42□□□□□ -0.42
CtifQ6PEE2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm11918-201ENSMUST00000121660 179 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm17150-201ENSMUST00000165577 381 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm42937-201ENSMUST00000197360 752 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm18307-201ENSMUST00000206864 949 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Gm44888-201ENSMUST00000209119 2541 ntBASIC12.41□□□□□ -0.42
CtifQ6PEE2 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CtifQ6PEE2 AA474408-201ENSMUST00000098110 3339 ntBASIC12.4□□□□□ -0.42
CtifQ6PEE2 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.4□□□□□ -0.42
CtifQ6PEE2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Mir1896-201ENSMUST00000122641 81 ntBASIC12.4□□□□□ -0.42
CtifQ6PEE2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.4□□□□□ -0.42
CtifQ6PEE2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Proscos-202ENSMUST00000178990 666 ntBASIC12.4□□□□□ -0.42
CtifQ6PEE2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Gm10076-201ENSMUST00000073238 384 ntBASIC12.4□□□□□ -0.42
CtifQ6PEE2 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.4□□□□□ -0.42
CtifQ6PEE2 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CtifQ6PEE2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CtifQ6PEE2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms