Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Gm9192-201ENSMUST00000183221 985 ntBASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Gm3096-201ENSMUST00000185770 364 ntBASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 BC043934-202ENSMUST00000185694 2356 ntBASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gm11222-201ENSMUST00000119005 738 ntBASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gm19287-201ENSMUST00000203190 358 ntBASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gm19187-201ENSMUST00000206781 892 ntBASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Smarcd3Q6P9Z1 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Gm11960-201ENSMUST00000122068 925 ntBASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms