Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf8Q6DID3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf8Q6DID3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scaf8Q6DID3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Scaf8Q6DID3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm25053-201ENSMUST00000103982 133 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm25922-201ENSMUST00000104281 130 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm14497-201ENSMUST00000119537 580 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm14034-201ENSMUST00000120147 551 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm14993-201ENSMUST00000121180 164 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm25554-201ENSMUST00000158075 113 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm24679-201ENSMUST00000158762 111 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm25830-201ENSMUST00000158923 132 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm42511-201ENSMUST00000196160 234 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm25053-202ENSMUST00000199731 132 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm5468-202ENSMUST00000227851 682 ntBASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scaf8Q6DID3 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm11500-201ENSMUST00000118237 601 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm9673-201ENSMUST00000119287 781 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm16030-201ENSMUST00000159098 603 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm23400-201ENSMUST00000174994 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm26463-201ENSMUST00000175065 101 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm24332-201ENSMUST00000175102 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm25959-201ENSMUST00000175112 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm22475-201ENSMUST00000175169 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm22903-201ENSMUST00000175193 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm25070-201ENSMUST00000175237 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm24159-201ENSMUST00000175264 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm25299-201ENSMUST00000175283 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm23798-201ENSMUST00000175560 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm23802-201ENSMUST00000175565 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm25708-201ENSMUST00000177687 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm24370-201ENSMUST00000178007 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm23049-201ENSMUST00000178068 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm28019-201ENSMUST00000178138 101 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm25571-201ENSMUST00000178322 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm25355-201ENSMUST00000178456 101 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm24975-201ENSMUST00000178492 101 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm23189-201ENSMUST00000178954 102 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm25100-201ENSMUST00000179750 101 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm23064-201ENSMUST00000179866 101 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm7741-201ENSMUST00000181445 989 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm43249-201ENSMUST00000200464 458 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm44216-201ENSMUST00000203942 157 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm272-201ENSMUST00000222073 919 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 CT025538.2-201ENSMUST00000226083 772 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gm9791-201ENSMUST00000060997 447 ntBASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scaf8Q6DID3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms