Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.23□□□□□ -0.61
ClpbQ60649 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.23□□□□□ -0.61
ClpbQ60649 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ClpbQ60649 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ClpbQ60649 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ClpbQ60649 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
ClpbQ60649 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
ClpbQ60649 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
ClpbQ60649 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
ClpbQ60649 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ClpbQ60649 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.22□□□□□ -0.61
ClpbQ60649 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.22□□□□□ -0.61
ClpbQ60649 Gm5419-201ENSMUST00000119301 527 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.22□□□□□ -0.61
ClpbQ60649 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Gm8343-201ENSMUST00000182705 994 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.22□□□□□ -0.61
ClpbQ60649 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.22□□□□□ -0.61
ClpbQ60649 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Gm807-202ENSMUST00000224929 408 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.22□□□□□ -0.61
ClpbQ60649 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpbQ60649 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.22□□□□□ -0.61
ClpbQ60649 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
ClpbQ60649 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Gm26286-201ENSMUST00000104166 134 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Gm23596-201ENSMUST00000104304 132 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
ClpbQ60649 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Gm12501-201ENSMUST00000119163 529 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Gm14441-201ENSMUST00000121960 540 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 B9d1os-201ENSMUST00000137010 674 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Gm21811-201ENSMUST00000096485 930 ntBASIC11.21□□□□□ -0.61
ClpbQ60649 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpbQ60649 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClpbQ60649 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClpbQ60649 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.21□□□□□ -0.62
ClpbQ60649 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.21□□□□□ -0.62
ClpbQ60649 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ClpbQ60649 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClpbQ60649 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClpbQ60649 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClpbQ60649 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.2□□□□□ -0.62
ClpbQ60649 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms