Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm14130-201ENSMUST00000118417 987 ntBASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm24749-201ENSMUST00000157838 343 ntBASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm28071-201ENSMUST00000190355 478 ntBASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Rps4l-202ENSMUST00000204242 789 ntBASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm9797-202ENSMUST00000218003 294 ntBASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5d-4Q5R1F6 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm11509-201ENSMUST00000117358 325 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm12749-201ENSMUST00000122138 1159 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm8343-201ENSMUST00000182705 994 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm28686-201ENSMUST00000187404 609 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm38228-201ENSMUST00000193169 1293 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm43002-201ENSMUST00000200310 155 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm21027-201ENSMUST00000219300 1236 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm26448-201ENSMUST00000082446 203 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms