Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn2bQ56A07 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn2bQ56A07 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Scn2bQ56A07 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn2bQ56A07 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.52□□□□□ -0.56
Scn2bQ56A07 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn2bQ56A07 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Scn2bQ56A07 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Gm15004-201ENSMUST00000119192 630 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Gm25700-201ENSMUST00000177693 110 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 Gm32999-201ENSMUST00000192693 562 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Gm19187-201ENSMUST00000206781 892 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Gm5455-201ENSMUST00000058710 715 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 Mir433-201ENSMUST00000093564 124 ntBASIC11.52□□□□□ -0.57
Scn2bQ56A07 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scn2bQ56A07 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.51□□□□□ -0.57
Scn2bQ56A07 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Gm45598-202ENSMUST00000210719 986 ntBASIC11.51□□□□□ -0.57
Scn2bQ56A07 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.51□□□□□ -0.57
Scn2bQ56A07 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.51□□□□□ -0.57
Scn2bQ56A07 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.51□□□□□ -0.57
Scn2bQ56A07 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scn2bQ56A07 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms