Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Arhgef40Q3UPH7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Arhgef40Q3UPH7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Gm5822-201ENSMUST00000161562 1378 ntBASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Gm12129-201ENSMUST00000120104 1147 ntBASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Gm16547-201ENSMUST00000159474 293 ntBASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Gm19927-201ENSMUST00000185792 781 ntBASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Arhgef40Q3UPH7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Snord17-201ENSMUST00000104526 238 ntBASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Gm13039-201ENSMUST00000118638 794 ntBASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Mir432-201ENSMUST00000157230 75 ntBASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Gm6331-201ENSMUST00000217890 450 ntBASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 CT025618.1-203ENSMUST00000227008 589 ntBASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 AC142266.1-201ENSMUST00000228107 415 ntBASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Gm10254-201ENSMUST00000052888 867 ntBASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Arhgef40Q3UPH7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Gm45094-201ENSMUST00000207013 617 ntBASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Arhgef40Q3UPH7 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Gm7069-201ENSMUST00000182418 1008 ntBASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Gm7627-201ENSMUST00000183205 999 ntBASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Arhgef40Q3UPH7 Gm43002-201ENSMUST00000200310 155 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms