Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm13350-201ENSMUST00000120519 479 ntBASIC12.37□□□□□ -0.43
Trim43aQ3TL54 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Cts7-204ENSMUST00000225321 1257 ntBASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43aQ3TL54 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm14726-201ENSMUST00000120623 896 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm25668-201ENSMUST00000157700 129 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm2991-201ENSMUST00000173338 480 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm26956-201ENSMUST00000182176 986 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm6621-201ENSMUST00000193251 772 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm5950-201ENSMUST00000213337 772 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.36□□□□□ -0.43
Trim43aQ3TL54 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Gm24255-201ENSMUST00000104481 128 ntBASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms