Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Vps8-202ENSMUST00000096192 4942 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm44510-201ENSMUST00000206288 4532 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm12384-201ENSMUST00000119228 919 ntBASIC9.54□□□□□ -0.88
Trim63Q38HM4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm17968-201ENSMUST00000194902 784 ntBASIC9.54□□□□□ -0.88
Trim63Q38HM4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm16476-201ENSMUST00000221544 139 ntBASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim63Q38HM4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm24231-201ENSMUST00000104315 133 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm15427-201ENSMUST00000117288 531 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm12892-201ENSMUST00000117367 1146 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms