Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm42968-201ENSMUST00000198578 1372 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm23612-201ENSMUST00000103823 110 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm26286-201ENSMUST00000104166 134 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm15018-201ENSMUST00000117090 633 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm23576-201ENSMUST00000179918 110 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.85□□□□□ -0.51
Col9a1Q05722 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC11.85□□□□□ -0.51
Col9a1Q05722 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm5449-201ENSMUST00000081132 357 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.85□□□□□ -0.51
Col9a1Q05722 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col9a1Q05722 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Col9a1Q05722 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col9a1Q05722 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm23129-201ENSMUST00000104259 132 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm15933-201ENSMUST00000117215 616 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm22143-201ENSMUST00000157401 203 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm25735-201ENSMUST00000175164 215 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm6946-201ENSMUST00000182237 987 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Mir6359-201ENSMUST00000183668 81 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm38177-201ENSMUST00000192213 1040 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm44315-201ENSMUST00000203041 219 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms