Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.5□□□□□ -0.41
VcpQ01853 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VcpQ01853 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Gm11246-201ENSMUST00000120880 345 ntBASIC12.5□□□□□ -0.41
VcpQ01853 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VcpQ01853 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.5□□□□□ -0.41
VcpQ01853 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.5□□□□□ -0.41
VcpQ01853 Gm5621-201ENSMUST00000187303 640 ntBASIC12.5□□□□□ -0.41
VcpQ01853 Gm4482-201ENSMUST00000200876 742 ntBASIC12.5□□□□□ -0.41
VcpQ01853 Gm43962-201ENSMUST00000203898 190 ntBASIC12.5□□□□□ -0.41
VcpQ01853 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Gm19640-201ENSMUST00000214849 464 ntBASIC12.5□□□□□ -0.41
VcpQ01853 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.5□□□□□ -0.41
VcpQ01853 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.5□□□□□ -0.41
VcpQ01853 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VcpQ01853 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.5□□□□□ -0.41
VcpQ01853 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
VcpQ01853 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.5□□□□□ -0.41
VcpQ01853 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VcpQ01853 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VcpQ01853 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.5□□□□□ -0.41
VcpQ01853 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.5□□□□□ -0.41
VcpQ01853 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.5□□□□□ -0.41
VcpQ01853 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.5□□□□□ -0.41
VcpQ01853 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
VcpQ01853 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VcpQ01853 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.49□□□□□ -0.41
VcpQ01853 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VcpQ01853 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VcpQ01853 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.49□□□□□ -0.41
VcpQ01853 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Gm12196-201ENSMUST00000120954 262 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.49□□□□□ -0.41
VcpQ01853 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.49□□□□□ -0.41
VcpQ01853 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.49□□□□□ -0.41
VcpQ01853 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.49□□□□□ -0.41
VcpQ01853 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.49□□□□□ -0.41
VcpQ01853 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.49□□□□□ -0.41
VcpQ01853 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Gm10774-201ENSMUST00000188689 204 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Gm18711-201ENSMUST00000199341 750 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.49□□□□□ -0.41
VcpQ01853 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VcpQ01853 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VcpQ01853 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VcpQ01853 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VcpQ01853 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VcpQ01853 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VcpQ01853 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VcpQ01853 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.48□□□□□ -0.41
VcpQ01853 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VcpQ01853 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Gm12948-201ENSMUST00000119406 682 ntBASIC12.48□□□□□ -0.41
VcpQ01853 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms