Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.08□□□□□ -0.64
Nkx3-2P97503 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm7467-201ENSMUST00000185173 652 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm5714-201ENSMUST00000197343 566 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.07□□□□□ -0.64
Nkx3-2P97503 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx3-2P97503 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.06□□□□□ -0.64
Nkx3-2P97503 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.06□□□□□ -0.64
Nkx3-2P97503 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.06□□□□□ -0.64
Nkx3-2P97503 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Gm15881-201ENSMUST00000148792 942 ntBASIC11.06□□□□□ -0.64
Nkx3-2P97503 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Gm3508-201ENSMUST00000186012 792 ntBASIC11.06□□□□□ -0.64
Nkx3-2P97503 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Gm43916-201ENSMUST00000205062 967 ntBASIC11.06□□□□□ -0.64
Nkx3-2P97503 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Gm29787-201ENSMUST00000222129 849 ntBASIC11.06□□□□□ -0.64
Nkx3-2P97503 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.06□□□□□ -0.64
Nkx3-2P97503 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Nkx3-2P97503 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx3-2P97503 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms