Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm15615-201ENSMUST00000118876 198 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm24954-201ENSMUST00000178831 110 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm24279-201ENSMUST00000104236 131 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm12791-201ENSMUST00000120788 655 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm14993-201ENSMUST00000121180 164 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Cacna1aP97445 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Map1b-203ENSMUST00000223725 2669 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm13351-201ENSMUST00000118087 414 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm12684-201ENSMUST00000118675 999 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm4462-201ENSMUST00000166453 492 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm7211-201ENSMUST00000172692 1118 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm9192-201ENSMUST00000183221 985 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm37782-201ENSMUST00000194879 678 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cacna1aP97445 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cacna1aP97445 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm27675-201ENSMUST00000184527 94 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.8□□□□□ -0.68
Cacna1aP97445 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC10.8□□□□□ -0.68
Cacna1aP97445 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cacna1aP97445 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms