Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Gm25881-201ENSMUST00000157783 103 ntBASIC12.83□□□□□ -0.36
Lig3P97386 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.83□□□□□ -0.36
Lig3P97386 Gm16296-201ENSMUST00000159905 325 ntBASIC12.83□□□□□ -0.36
Lig3P97386 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.83□□□□□ -0.36
Lig3P97386 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.83□□□□□ -0.36
Lig3P97386 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.83□□□□□ -0.36
Lig3P97386 Gm9630-201ENSMUST00000178304 885 ntBASIC12.83□□□□□ -0.36
Lig3P97386 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Gm4482-201ENSMUST00000200876 742 ntBASIC12.83□□□□□ -0.36
Lig3P97386 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.83□□□□□ -0.36
Lig3P97386 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.83□□□□□ -0.36
Lig3P97386 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.83□□□□□ -0.36
Lig3P97386 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.83□□□□□ -0.36
Lig3P97386 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lig3P97386 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lig3P97386 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lig3P97386 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Lig3P97386 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lig3P97386 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.82□□□□□ -0.36
Lig3P97386 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.82□□□□□ -0.36
Lig3P97386 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.82□□□□□ -0.36
Lig3P97386 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.82□□□□□ -0.36
Lig3P97386 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Mir7677-201ENSMUST00000184226 67 ntBASIC12.82□□□□□ -0.36
Lig3P97386 Gm17889-201ENSMUST00000198410 598 ntBASIC12.82□□□□□ -0.36
Lig3P97386 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Gm6905-201ENSMUST00000205729 511 ntBASIC12.82□□□□□ -0.36
Lig3P97386 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.82□□□□□ -0.36
Lig3P97386 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.82□□□□□ -0.36
Lig3P97386 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.82□□□□□ -0.36
Lig3P97386 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.82□□□□□ -0.36
Lig3P97386 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lig3P97386 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.82□□□□□ -0.36
Lig3P97386 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.82□□□□□ -0.36
Lig3P97386 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lig3P97386 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lig3P97386 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.81□□□□□ -0.36
Lig3P97386 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.81□□□□□ -0.36
Lig3P97386 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lig3P97386 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.81□□□□□ -0.36
Lig3P97386 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lig3P97386 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.81□□□□□ -0.36
Lig3P97386 Gm12196-201ENSMUST00000120954 262 ntBASIC12.81□□□□□ -0.36
Lig3P97386 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.81□□□□□ -0.36
Lig3P97386 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Lig3P97386 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.81□□□□□ -0.36
Lig3P97386 Gm270-201ENSMUST00000223010 976 ntBASIC12.81□□□□□ -0.36
Lig3P97386 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Lig3P97386 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms