Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm9540-201ENSMUST00000188230 478 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim43cP86449 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim43cP86449 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43cP86449 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim43cP86449 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim43cP86449 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trim43cP86449 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim43cP86449 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Trim43cP86449 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Trim43cP86449 Gm8731-201ENSMUST00000118088 412 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 Gm15374-201ENSMUST00000119313 844 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim43cP86449 Gm13263-201ENSMUST00000121271 838 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Trim43cP86449 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim43cP86449 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim43cP86449 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim43cP86449 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.68□□□□□ -0.38
Trim43cP86449 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43cP86449 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.67□□□□□ -0.38
Trim43cP86449 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim43cP86449 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.67□□□□□ -0.38
Trim43cP86449 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.67□□□□□ -0.38
Trim43cP86449 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim43cP86449 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trim43cP86449 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Trim43cP86449 Gm12501-201ENSMUST00000119163 529 ntBASIC12.67□□□□□ -0.38
Trim43cP86449 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim43cP86449 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43cP86449 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Gm37835-201ENSMUST00000193305 361 ntBASIC12.67□□□□□ -0.38
Trim43cP86449 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Trim43cP86449 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.67□□□□□ -0.38
Trim43cP86449 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Gm10288-201ENSMUST00000084614 537 ntBASIC12.67□□□□□ -0.38
Trim43cP86449 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43cP86449 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim43cP86449 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trim43cP86449 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms