Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.65□□□□□ -0.38
CiitaP79621 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CiitaP79621 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CiitaP79621 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CiitaP79621 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.64□□□□□ -0.39
CiitaP79621 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.64□□□□□ -0.39
CiitaP79621 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.64□□□□□ -0.39
CiitaP79621 Gm14071-201ENSMUST00000117817 509 ntBASIC12.64□□□□□ -0.39
CiitaP79621 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.64□□□□□ -0.39
CiitaP79621 Gm12208-201ENSMUST00000122004 163 ntBASIC12.64□□□□□ -0.39
CiitaP79621 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.64□□□□□ -0.39
CiitaP79621 Mir7076-201ENSMUST00000183519 74 ntBASIC12.64□□□□□ -0.39
CiitaP79621 Gm3551-201ENSMUST00000190750 664 ntBASIC12.64□□□□□ -0.39
CiitaP79621 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.64□□□□□ -0.39
CiitaP79621 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
CiitaP79621 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.64□□□□□ -0.39
CiitaP79621 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.64□□□□□ -0.39
CiitaP79621 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.64□□□□□ -0.39
CiitaP79621 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.64□□□□□ -0.39
CiitaP79621 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CiitaP79621 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
CiitaP79621 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CiitaP79621 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.63□□□□□ -0.39
CiitaP79621 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.63□□□□□ -0.39
CiitaP79621 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CiitaP79621 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
CiitaP79621 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
CiitaP79621 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.63□□□□□ -0.39
CiitaP79621 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.63□□□□□ -0.39
CiitaP79621 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Gm15374-201ENSMUST00000119313 844 ntBASIC12.63□□□□□ -0.39
CiitaP79621 Gm9089-201ENSMUST00000122027 526 ntBASIC12.63□□□□□ -0.39
CiitaP79621 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.63□□□□□ -0.39
CiitaP79621 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.63□□□□□ -0.39
CiitaP79621 Gm22138-201ENSMUST00000158748 128 ntBASIC12.63□□□□□ -0.39
CiitaP79621 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.63□□□□□ -0.39
CiitaP79621 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Gm17825-201ENSMUST00000206836 794 ntBASIC12.63□□□□□ -0.39
CiitaP79621 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.63□□□□□ -0.39
CiitaP79621 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.63□□□□□ -0.39
CiitaP79621 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CiitaP79621 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CiitaP79621 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.63□□□□□ -0.39
CiitaP79621 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CiitaP79621 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CiitaP79621 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CiitaP79621 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms