Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msx3P70354 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Msx3P70354 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.99□□□□□ -0.49
Msx3P70354 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msx3P70354 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Msx3P70354 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx3P70354 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msx3P70354 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx3P70354 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.98□□□□□ -0.49
Msx3P70354 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Msx3P70354 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Msx3P70354 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Gm23949-201ENSMUST00000104027 127 ntBASIC11.98□□□□□ -0.49
Msx3P70354 Gm23596-201ENSMUST00000104304 132 ntBASIC11.98□□□□□ -0.49
Msx3P70354 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.98□□□□□ -0.49
Msx3P70354 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.98□□□□□ -0.49
Msx3P70354 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Gm24749-201ENSMUST00000157838 343 ntBASIC11.98□□□□□ -0.49
Msx3P70354 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Msx3P70354 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.98□□□□□ -0.49
Msx3P70354 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.98□□□□□ -0.49
Msx3P70354 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.98□□□□□ -0.49
Msx3P70354 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Msx3P70354 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Msx3P70354 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Msx3P70354 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msx3P70354 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Msx3P70354 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Msx3P70354 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.98□□□□□ -0.49
Msx3P70354 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Msx3P70354 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.97□□□□□ -0.49
Msx3P70354 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Msx3P70354 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Gm11663-201ENSMUST00000117888 290 ntBASIC11.97□□□□□ -0.49
Msx3P70354 Gm12380-201ENSMUST00000119012 544 ntBASIC11.97□□□□□ -0.49
Msx3P70354 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.97□□□□□ -0.49
Msx3P70354 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Gm8815-201ENSMUST00000173809 620 ntBASIC11.97□□□□□ -0.49
Msx3P70354 Gm28686-201ENSMUST00000187404 609 ntBASIC11.97□□□□□ -0.49
Msx3P70354 Gm3332-201ENSMUST00000189337 928 ntBASIC11.97□□□□□ -0.49
Msx3P70354 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Msx3P70354 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.97□□□□□ -0.49
Msx3P70354 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.97□□□□□ -0.49
Msx3P70354 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Msx3P70354 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.97□□□□□ -0.49
Msx3P70354 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.97□□□□□ -0.49
Msx3P70354 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Msx3P70354 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Msx3P70354 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Msx3P70354 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.97□□□□□ -0.49
Msx3P70354 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms