Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm13296-201ENSMUST00000117854 997 ntBASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm13097-201ENSMUST00000210722 397 ntBASIC12.88□□□□□ -0.35
Hmgb1P63158 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.88□□□□□ -0.35
Hmgb1P63158 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.88□□□□□ -0.35
Hmgb1P63158 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.87□□□□□ -0.35
Hmgb1P63158 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.87□□□□□ -0.35
Hmgb1P63158 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.87□□□□□ -0.35
Hmgb1P63158 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.87□□□□□ -0.35
Hmgb1P63158 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.87□□□□□ -0.35
Hmgb1P63158 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgb1P63158 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm37389-201ENSMUST00000194885 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm15276-201ENSMUST00000145953 498 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm44364-201ENSMUST00000198368 141 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm18065-201ENSMUST00000221395 526 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 Lect2-202ENSMUST00000225183 823 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms