Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.41□□□□□ -0.9
Lmo4P61969 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.41□□□□□ -0.9
Lmo4P61969 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Lmo4P61969 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.41□□□□□ -0.9
Lmo4P61969 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lmo4P61969 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.4□□□□□ -0.9
Lmo4P61969 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Gm45003-201ENSMUST00000205875 2158 ntBASIC9.4□□□□□ -0.9
Lmo4P61969 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Lmo4P61969 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lmo4P61969 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Lmo4P61969 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Gm13117-201ENSMUST00000120894 691 ntBASIC9.4□□□□□ -0.9
Lmo4P61969 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.4□□□□□ -0.9
Lmo4P61969 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.4□□□□□ -0.9
Lmo4P61969 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.4□□□□□ -0.9
Lmo4P61969 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.4□□□□□ -0.9
Lmo4P61969 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Lmo4P61969 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.4□□□□□ -0.9
Lmo4P61969 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.4□□□□□ -0.9
Lmo4P61969 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Lmo4P61969 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.4□□□□□ -0.9
Lmo4P61969 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.4□□□□□ -0.9
Lmo4P61969 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Lmo4P61969 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.4□□□□□ -0.9
Lmo4P61969 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC9.4□□□□□ -0.9
Lmo4P61969 Gm30671-201ENSMUST00000214898 318 ntBASIC9.4□□□□□ -0.9
Lmo4P61969 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Lmo4P61969 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Lmo4P61969 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Lmo4P61969 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lmo4P61969 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Lmo4P61969 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.4□□□□□ -0.91
Lmo4P61969 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.4□□□□□ -0.91
Lmo4P61969 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Paupar-201ENSMUST00000194826 3482 ntBASIC9.4□□□□□ -0.91
Lmo4P61969 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.4□□□□□ -0.91
Lmo4P61969 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lmo4P61969 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Lmo4P61969 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.4□□□□□ -0.91
Lmo4P61969 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms