Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Gm2383-201ENSMUST00000181461 807 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Gm3096-201ENSMUST00000185770 364 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 AA914427-201ENSMUST00000193194 1166 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 Gm38317-201ENSMUST00000195564 343 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a1P61620 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 Mir433-201ENSMUST00000093564 124 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Sec61a1P61620 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a1P61620 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Sec61a1P61620 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.3□□□□□ -0.76
Sec61a1P61620 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm14109-201ENSMUST00000118814 309 ntBASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms