Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.07□□□□□ -0.96
Ctdsp1P58466 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.07□□□□□ -0.96
Ctdsp1P58466 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.07□□□□□ -0.96
Ctdsp1P58466 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm11573-201ENSMUST00000119956 394 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm11597-201ENSMUST00000121423 964 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm27331-201ENSMUST00000183705 60 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm37042-201ENSMUST00000193816 581 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Nln-205ENSMUST00000224945 2486 ntBASIC9.06□□□□□ -0.96
Ctdsp1P58466 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ctdsp1P58466 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.05□□□□□ -0.96
Ctdsp1P58466 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.05□□□□□ -0.96
Ctdsp1P58466 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.05□□□□□ -0.96
Ctdsp1P58466 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.05□□□□□ -0.96
Ctdsp1P58466 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ctdsp1P58466 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ctdsp1P58466 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.05□□□□□ -0.96
Ctdsp1P58466 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms