Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.44□□□□□ -0.42
NrlP54846 Gm24398-201ENSMUST00000157870 109 ntBASIC12.44□□□□□ -0.42
NrlP54846 Gm27390-201ENSMUST00000184516 176 ntBASIC12.44□□□□□ -0.42
NrlP54846 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.44□□□□□ -0.42
NrlP54846 Gm5298-201ENSMUST00000201122 892 ntBASIC12.44□□□□□ -0.42
NrlP54846 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.44□□□□□ -0.42
NrlP54846 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.44□□□□□ -0.42
NrlP54846 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
NrlP54846 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.44□□□□□ -0.42
NrlP54846 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NrlP54846 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.43□□□□□ -0.42
NrlP54846 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.43□□□□□ -0.42
NrlP54846 Gm12419-201ENSMUST00000116649 636 ntBASIC12.43□□□□□ -0.42
NrlP54846 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.43□□□□□ -0.42
NrlP54846 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Gm25951-201ENSMUST00000175330 64 ntBASIC12.43□□□□□ -0.42
NrlP54846 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Gm8531-201ENSMUST00000188319 893 ntBASIC12.43□□□□□ -0.42
NrlP54846 Gm37981-201ENSMUST00000194280 535 ntBASIC12.43□□□□□ -0.42
NrlP54846 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
NrlP54846 Gm45594-201ENSMUST00000211717 241 ntBASIC12.43□□□□□ -0.42
NrlP54846 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NrlP54846 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NrlP54846 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NrlP54846 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.43□□□□□ -0.42
NrlP54846 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NrlP54846 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NrlP54846 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.43□□□□□ -0.42
NrlP54846 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NrlP54846 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.42□□□□□ -0.42
NrlP54846 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.42□□□□□ -0.42
NrlP54846 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.42□□□□□ -0.42
NrlP54846 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NrlP54846 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
NrlP54846 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.42□□□□□ -0.42
NrlP54846 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Gm9136-201ENSMUST00000193368 454 ntBASIC12.42□□□□□ -0.42
NrlP54846 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.42□□□□□ -0.42
NrlP54846 Gm8342-201ENSMUST00000209839 757 ntBASIC12.42□□□□□ -0.42
NrlP54846 Gm7940-201ENSMUST00000218195 769 ntBASIC12.42□□□□□ -0.42
NrlP54846 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NrlP54846 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NrlP54846 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.42□□□□□ -0.42
NrlP54846 Gm5451-201ENSMUST00000080545 579 ntBASIC12.42□□□□□ -0.42
NrlP54846 Gm23680-201ENSMUST00000083162 164 ntBASIC12.42□□□□□ -0.42
NrlP54846 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NrlP54846 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NrlP54846 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NrlP54846 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NrlP54846 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NrlP54846 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 149.3 ms