Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Gm26047-202ENSMUST00000198840 115 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.72□□□□□ -0.05
Msh6P54276 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.72□□□□□ -0.05
Msh6P54276 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.72□□□□□ -0.05
Msh6P54276 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Msh6P54276 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.72□□□□□ -0.05
Msh6P54276 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Msh6P54276 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.72□□□□□ -0.05
Msh6P54276 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.72□□□□□ -0.05
Msh6P54276 Gm9673-201ENSMUST00000119287 781 ntBASIC14.72□□□□□ -0.05
Msh6P54276 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.72□□□□□ -0.05
Msh6P54276 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.72□□□□□ -0.05
Msh6P54276 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh6P54276 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.72□□□□□ -0.05
Msh6P54276 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.71□□□□□ -0.05
Msh6P54276 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Msh6P54276 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Msh6P54276 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh6P54276 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 Gm25148-201ENSMUST00000104611 123 ntBASIC14.71□□□□□ -0.06
Msh6P54276 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.71□□□□□ -0.06
Msh6P54276 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.71□□□□□ -0.06
Msh6P54276 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 Gm22379-201ENSMUST00000157480 131 ntBASIC14.71□□□□□ -0.06
Msh6P54276 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Msh6P54276 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.71□□□□□ -0.06
Msh6P54276 Gm7741-201ENSMUST00000181445 989 ntBASIC14.71□□□□□ -0.06
Msh6P54276 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.71□□□□□ -0.06
Msh6P54276 Gm28833-201ENSMUST00000189671 559 ntBASIC14.71□□□□□ -0.06
Msh6P54276 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.71□□□□□ -0.06
Msh6P54276 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.71□□□□□ -0.06
Msh6P54276 Gm44647-201ENSMUST00000207402 428 ntBASIC14.71□□□□□ -0.06
Msh6P54276 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.71□□□□□ -0.06
Msh6P54276 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.71□□□□□ -0.06
Msh6P54276 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.71□□□□□ -0.06
Msh6P54276 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.71□□□□□ -0.06
Msh6P54276 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Msh6P54276 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Msh6P54276 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.71□□□□□ -0.06
Msh6P54276 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh6P54276 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Msh6P54276 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Msh6P54276 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Msh6P54276 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.7□□□□□ -0.06
Msh6P54276 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Msh6P54276 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.7□□□□□ -0.06
Msh6P54276 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Msh6P54276 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Msh6P54276 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Msh6P54276 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.7□□□□□ -0.06
Msh6P54276 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Gm4294-201ENSMUST00000105169 614 ntBASIC14.7□□□□□ -0.06
Msh6P54276 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 173.9 ms