Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ptx3P48759 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ptx3P48759 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.91□□□□□ -0.66
Ptx3P48759 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.91□□□□□ -0.66
Ptx3P48759 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Ptx3P48759 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.91□□□□□ -0.66
Ptx3P48759 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ptx3P48759 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ptx3P48759 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.91□□□□□ -0.66
Ptx3P48759 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.91□□□□□ -0.66
Ptx3P48759 Gm43916-201ENSMUST00000205062 967 ntBASIC10.91□□□□□ -0.66
Ptx3P48759 Gm17831-201ENSMUST00000205579 900 ntBASIC10.91□□□□□ -0.66
Ptx3P48759 Gm6108-201ENSMUST00000208365 367 ntBASIC10.91□□□□□ -0.66
Ptx3P48759 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.91□□□□□ -0.66
Ptx3P48759 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ptx3P48759 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Ptx3P48759 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ptx3P48759 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ptx3P48759 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ptx3P48759 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ptx3P48759 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Gm22144-201ENSMUST00000157402 102 ntBASIC10.9□□□□□ -0.66
Ptx3P48759 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Gm6114-201ENSMUST00000182472 968 ntBASIC10.9□□□□□ -0.66
Ptx3P48759 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.9□□□□□ -0.66
Ptx3P48759 Gm6867-201ENSMUST00000219165 425 ntBASIC10.9□□□□□ -0.66
Ptx3P48759 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.9□□□□□ -0.66
Ptx3P48759 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.9□□□□□ -0.66
Ptx3P48759 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ptx3P48759 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ptx3P48759 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ptx3P48759 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ptx3P48759 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ptx3P48759 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ptx3P48759 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.89□□□□□ -0.67
Ptx3P48759 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.89□□□□□ -0.67
Ptx3P48759 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ptx3P48759 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.89□□□□□ -0.67
Ptx3P48759 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ptx3P48759 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.89□□□□□ -0.67
Ptx3P48759 Gm22920-201ENSMUST00000102175 109 ntBASIC10.89□□□□□ -0.67
Ptx3P48759 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms