Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rfx3P48381 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.55□□□□□ -0.72
Rfx3P48381 Gm5419-201ENSMUST00000119301 527 ntBASIC10.55□□□□□ -0.72
Rfx3P48381 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.55□□□□□ -0.72
Rfx3P48381 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.55□□□□□ -0.72
Rfx3P48381 Gm7783-201ENSMUST00000204795 781 ntBASIC10.55□□□□□ -0.72
Rfx3P48381 Gm19187-201ENSMUST00000206781 892 ntBASIC10.55□□□□□ -0.72
Rfx3P48381 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.55□□□□□ -0.72
Rfx3P48381 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.55□□□□□ -0.72
Rfx3P48381 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Gzmn-202ENSMUST00000225535 989 ntBASIC10.55□□□□□ -0.72
Rfx3P48381 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.55□□□□□ -0.72
Rfx3P48381 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rfx3P48381 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Rfx3P48381 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rfx3P48381 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.54□□□□□ -0.72
Rfx3P48381 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Gm12164-201ENSMUST00000121695 551 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rfx3P48381 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.54□□□□□ -0.72
Rfx3P48381 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rfx3P48381 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Rfx3P48381 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rfx3P48381 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rfx3P48381 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.54□□□□□ -0.72
Rfx3P48381 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rfx3P48381 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.53□□□□□ -0.72
Rfx3P48381 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms