Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.42□□□□□ -0.58
Gli1P47806 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.42□□□□□ -0.58
Gli1P47806 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gli1P47806 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.41□□□□□ -0.58
Gli1P47806 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.41□□□□□ -0.58
Gli1P47806 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.41□□□□□ -0.58
Gli1P47806 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.41□□□□□ -0.58
Gli1P47806 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gli1P47806 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Gli1P47806 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Gm24934-201ENSMUST00000103764 111 ntBASIC11.41□□□□□ -0.58
Gli1P47806 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.41□□□□□ -0.58
Gli1P47806 Gm15782-201ENSMUST00000121073 445 ntBASIC11.41□□□□□ -0.58
Gli1P47806 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Mir7032-201ENSMUST00000185154 79 ntBASIC11.41□□□□□ -0.58
Gli1P47806 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.41□□□□□ -0.58
Gli1P47806 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Gm45118-201ENSMUST00000208928 825 ntBASIC11.41□□□□□ -0.58
Gli1P47806 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.41□□□□□ -0.58
Gli1P47806 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.41□□□□□ -0.58
Gli1P47806 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Gli1P47806 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
Gli1P47806 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.41□□□□□ -0.58
Gli1P47806 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gli1P47806 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Gli1P47806 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.41□□□□□ -0.58
Gli1P47806 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gli1P47806 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Gli1P47806 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.4□□□□□ -0.58
Gli1P47806 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Gli1P47806 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.4□□□□□ -0.58
Gli1P47806 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Gm13611-201ENSMUST00000118269 318 ntBASIC11.4□□□□□ -0.58
Gli1P47806 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.4□□□□□ -0.58
Gli1P47806 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.4□□□□□ -0.58
Gli1P47806 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.4□□□□□ -0.58
Gli1P47806 Gm3508-201ENSMUST00000186012 792 ntBASIC11.4□□□□□ -0.58
Gli1P47806 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.4□□□□□ -0.58
Gli1P47806 Gm37201-201ENSMUST00000191845 523 ntBASIC11.4□□□□□ -0.58
Gli1P47806 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.4□□□□□ -0.58
Gli1P47806 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.4□□□□□ -0.58
Gli1P47806 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.4□□□□□ -0.58
Gli1P47806 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gli1P47806 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.4□□□□□ -0.58
Gli1P47806 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.4□□□□□ -0.58
Gli1P47806 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gli1P47806 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Gli1P47806 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Gli1P47806 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.59
Gli1P47806 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms