Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm5705-201ENSMUST00000066241 711 ntBASIC11.85□□□□□ -0.51
Vps4bP46467 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vps4bP46467 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.85□□□□□ -0.51
Vps4bP46467 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps4bP46467 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Vps4bP46467 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps4bP46467 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vps4bP46467 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Vps4bP46467 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.84□□□□□ -0.51
Vps4bP46467 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Vps4bP46467 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.84□□□□□ -0.51
Vps4bP46467 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vps4bP46467 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vps4bP46467 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vps4bP46467 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps4bP46467 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps4bP46467 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Vps4bP46467 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Vps4bP46467 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.83□□□□□ -0.51
Vps4bP46467 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Vps4bP46467 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Vps4bP46467 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.83□□□□□ -0.52
Vps4bP46467 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Gm13296-201ENSMUST00000117854 997 ntBASIC11.83□□□□□ -0.52
Vps4bP46467 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.83□□□□□ -0.52
Vps4bP46467 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.83□□□□□ -0.52
Vps4bP46467 Gm24990-201ENSMUST00000157406 323 ntBASIC11.83□□□□□ -0.52
Vps4bP46467 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Vps4bP46467 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.83□□□□□ -0.52
Vps4bP46467 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vps4bP46467 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms