Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh2P43247 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Msh2P43247 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Msh2P43247 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Msh2P43247 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.03□□□□□ -0.48
Msh2P43247 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Msh2P43247 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Msh2P43247 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.03□□□□□ -0.48
Msh2P43247 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.03□□□□□ -0.48
Msh2P43247 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.03□□□□□ -0.48
Msh2P43247 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.03□□□□□ -0.48
Msh2P43247 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msh2P43247 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msh2P43247 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Msh2P43247 Gm9230-201ENSMUST00000188228 532 ntBASIC12.03□□□□□ -0.48
Msh2P43247 Gm44651-201ENSMUST00000207343 372 ntBASIC12.03□□□□□ -0.48
Msh2P43247 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.03□□□□□ -0.48
Msh2P43247 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.03□□□□□ -0.48
Msh2P43247 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.03□□□□□ -0.48
Msh2P43247 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.03□□□□□ -0.48
Msh2P43247 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh2P43247 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msh2P43247 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Msh2P43247 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Msh2P43247 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msh2P43247 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.02□□□□□ -0.48
Msh2P43247 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.02□□□□□ -0.49
Msh2P43247 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.02□□□□□ -0.49
Msh2P43247 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.02□□□□□ -0.49
Msh2P43247 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.02□□□□□ -0.49
Msh2P43247 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh2P43247 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.02□□□□□ -0.49
Msh2P43247 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Gm19187-201ENSMUST00000206781 892 ntBASIC12.02□□□□□ -0.49
Msh2P43247 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh2P43247 Gm9257-201ENSMUST00000221254 232 ntBASIC12.02□□□□□ -0.49
Msh2P43247 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh2P43247 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.02□□□□□ -0.49
Msh2P43247 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.02□□□□□ -0.49
Msh2P43247 Gm10254-201ENSMUST00000052888 867 ntBASIC12.02□□□□□ -0.49
Msh2P43247 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Msh2P43247 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh2P43247 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh2P43247 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh2P43247 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh2P43247 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh2P43247 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh2P43247 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.01□□□□□ -0.49
Msh2P43247 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms